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Uncultivated Treponema sp. UBA7863 genome recovered from SRX834665

Identifiers
BioSample: SAMN06454597; Sample name: Treponema sp. UBA7863; SRA: SRS2035401
Organism
Treponema sp. UBA7863
cellular organisms; Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; unclassified Treponema
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA7863
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834665 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.90%
contamination_estimated0.74%
environmental_sampletrue
genome_coverage29.03
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747064.
Description

Uncultivated genome recovered from an assembly of the SRX834665 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454597
ID:
6454597

BioProject SRA Nucleotide

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