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Uncultivated Alphaproteobacteria bacterium UBA5956 genome recovered from SRX514549

Identifiers
BioSample: SAMN06450511; Sample name: Alphaproteobacteria bacterium UBA5956; SRA: SRS2034125
Organism
Alphaproteobacteria bacterium UBA5956
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAtlantic Ocean: Sargasso Sea
isolateUBA5956
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX514549 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated67.77%
contamination_estimated0.36%
environmental_sampletrue
genome_coverage26.38
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1230756.
Description

Uncultivated genome recovered from an assembly of the SRX514549 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450511
ID:
6450511

BioProject SRA Nucleotide

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