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Uncultivated Achromobacter sp. UBA5777 genome recovered from SRX823278

Identifiers
BioSample: SAMN06455693; Sample name: Achromobacter sp. UBA5777; SRA: SRS2034787
Organism
Achromobacter sp. UBA5777
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter; unclassified Achromobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5777
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823278 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.36%
contamination_estimated1.68%
environmental_sampletrue
genome_coverage25.74
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749895.
Description

Uncultivated genome recovered from an assembly of the SRX823278 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455693
ID:
6455693

BioProject SRA Nucleotide

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