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Uncultivated Akkermansiaceae bacterium UBA5020 genome recovered from SRX1203503

Identifiers
BioSample: SAMN06450693; Sample name: Akkermansiaceae bacterium UBA5020; SRA: SRS2032255
Organism
Akkermansiaceae bacterium UBA5020
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; Verrucomicrobiia; Verrucomicrobiales; Akkermansiaceae; unclassified Akkermansiaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:Highgate Springs, VT
isolateUBA5020
isolation sourcefreshwater
metagenome sourcefreshwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1203503 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.82%
contamination_estimated1.36%
environmental_sampletrue
genome_coverage49.26
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR2179959.
Description

Uncultivated genome recovered from an assembly of the SRX1203503 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450693
ID:
6450693

BioProject SRA Nucleotide

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