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Uncultivated Methylophilales bacterium UBA3117 genome recovered from SRX1050758

Identifiers
BioSample: SAMN06452671; Sample name: Methylophilales bacterium UBA3117; SRA: SRS2032084
Organism
Methylophilales bacterium UBA3117
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; unclassified Nitrosomonadales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationBaltic Sea
isolateUBA3117
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1050758 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.99%
contamination_estimated2.66%
environmental_sampletrue
genome_coverage21.51
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR2053290.
Description

Uncultivated genome recovered from an assembly of the SRX1050758 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452671
ID:
6452671

BioProject SRA Nucleotide

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