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Uncultivated Candidatus Marinimicrobia bacterium UBA3122 genome recovered from SRX648502

Identifiers
BioSample: SAMN06456234; Sample name: Candidatus Marinimicrobia bacterium UBA3122; SRA: SRS2035530
Organism
Candidatus Marinimicrobia bacterium UBA3122
cellular organisms; Bacteria; FCB group; Candidatus Neomarinimicrobiota; unclassified Candidatus Neomarinimicrobiota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationMexico: oxygen minimum zone off the coast of Manzanillo
isolateUBA3122
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX648502 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated70.59%
contamination_estimated2.20%
environmental_sampletrue
genome_coverage15.79
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1509799.
Description

Uncultivated genome recovered from an assembly of the SRX648502 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456234
ID:
6456234

BioProject SRA Nucleotide

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