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Uncultivated Ruminococcaceae bacterium UBA3215 genome recovered from SRX290720

Identifiers
BioSample: SAMN06457374; Sample name: Ruminococcaceae bacterium UBA3215; SRA: SRS2033201
Organism
Ruminococcaceae bacterium UBA3215
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3215
isolation sourcehigh methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290720 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated78.64%
contamination_estimated0.22%
environmental_sampletrue
genome_coverage39.28
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873610.
Description

Uncultivated genome recovered from an assembly of the SRX290720 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457374
ID:
6457374

BioProject SRA Nucleotide

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