Uncultivated Clostridium sp. UBA2308 genome recove... - BioSample - NCBI

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Uncultivated Clostridium sp. UBA2308 genome recovered from SRX822979

Identifiers: BioSample: SAMN06455159; Sample name: Clostridium sp. UBA2308; SRA: SRS2034557

Organism: Clostridium sp. UBA2308
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; unclassified Clostridium

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	USA:New York City
isolate	UBA2308
isolation source	wood
metagenome source	terrestrial metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX822979 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	75.86%
contamination_estimated	0.00%
environmental_sample	true
genome_coverage	24.1
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749596.

Description: Uncultivated genome recovered from an assembly of the SRX822979 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06455159
ID:: 6455159

BioProject SRA Nucleotide

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BioSample links for Nucleotide (Select 1245715233) (1)
BioSample
Uncultivated Clostridium sp. UBA2308 genome recovered from SRX822979
Uncultivated Clostridium sp. UBA2308 genome recovered from SRX822979

biosample
Nucleotide INSDC for Assembly (Select 23395928) (0)
Nucleotide
Psychrobacter immobilis isolate Psychrobacter immobilis NCIMB361, whole genome s...
Psychrobacter immobilis isolate Psychrobacter immobilis NCIMB361, whole genome shotgun sequencing project
gi|1935132548|emb|CAJHAA000000000.1 AA010000000

Nucleotide
Psychrobacter fjordensis BSw21516B
Psychrobacter fjordensis BSw21516B

biosample

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