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Uncultivated Stenotrophomonas maltophilia UBA1866 genome recovered from SRX822706

Identifiers
BioSample: SAMN06451467; Sample name: Stenotrophomonas maltophilia UBA1866; SRA: SRS2039120
Organism
Stenotrophomonas maltophilia
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia group
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA1866
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822706 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.55%
contamination_estimated1.58%
environmental_sampletrue
genome_coverage9.78
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749323.
Description

Uncultivated genome recovered from an assembly of the SRX822706 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451467
ID:
6451467

BioProject SRA Nucleotide

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