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Uncultivated Micavibrio sp. UBA2020 genome recovered from SRX645896

Identifiers
BioSample: SAMN06454464; Sample name: Micavibrio sp. UBA2020; SRA: SRS2034391
Organism
Micavibrio sp. UBA2020
cellular organisms; Bacteria; Bdellovibrionota; Bdellovibrionia; Bdellovibrionales; Pseudobdellovibrionaceae; Micavibrio; unclassified Micavibrio
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAustralia: Brisbane, Thorneside Wastewater Treatment Plant
isolateUBA2020
isolation sourceactivated sludge
metagenome sourcebioreactor sludge metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX645896 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated82.64%
contamination_estimated2.71%
environmental_sampletrue
genome_coverage29.11
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor sludge metagenome reads: SRR1506951.
Description

Uncultivated genome recovered from an assembly of the SRX645896 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454464
ID:
6454464

BioProject SRA Nucleotide

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