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Uncultivated Pseudomonas stutzeri UBA1598 genome recovered from SRX822381

Identifiers
BioSample: SAMN06451717; Sample name: Pseudomonas stutzeri UBA1598; SRA: SRS2038812
Organism
Stutzerimonas stutzeri
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Stutzerimonas; Stutzerimonas stutzeri group; Stutzerimonas stutzeri subgroup
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA1598
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822381 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.71%
contamination_estimated1.37%
environmental_sampletrue
genome_coverage67.14
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748998.
Description

Uncultivated genome recovered from an assembly of the SRX822381 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451717
ID:
6451717

BioProject SRA Nucleotide

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