Uncultivated Enterobacteriaceae bacterium UBA1640 ... - BioSample - NCBI

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Uncultivated Enterobacteriaceae bacterium UBA1640 genome recovered from SRX822099

Identifiers: BioSample: SAMN06451423; Sample name: Enterobacteriaceae bacterium UBA1640; SRA: SRS2038513

Organism: Enterobacteriaceae bacterium UBA1640
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; unclassified Enterobacteriaceae

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	USA:New York City
isolate	UBA1640
isolation source	plastic
metagenome source	terrestrial metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX822099 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	76.72%
contamination_estimated	1.10%
environmental_sample	true
genome_coverage	10.23
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748672.

Description: Uncultivated genome recovered from an assembly of the SRX822099 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06451423
ID:: 6451423

BioProject SRA Nucleotide

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BioSample links for Nucleotide (Select 1244553752) (1)
BioSample
Uncultivated Enterobacteriaceae bacterium UBA1640 genome recovered from SRX82209...
Uncultivated Enterobacteriaceae bacterium UBA1640 genome recovered from SRX822099

biosample
Mus musculus paired box 2 (Pax2), transcript variant 9, mRNA
Mus musculus paired box 2 (Pax2), transcript variant 9, mRNA
gi|1579876422|ref|NM_001368750.1|

Nucleotide
synaptosomal-associated protein 25 isoform SNAP25B [Homo sapiens]
synaptosomal-associated protein 25 isoform SNAP25B [Homo sapiens]
gi|18765735|ref|NP_570824.1|

Protein

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