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Uncultivated Porphyromonadaceae bacterium UBA1681 genome recovered from SRX498680

Identifiers
BioSample: SAMN06452872; Sample name: Porphyromonadaceae bacterium UBA1681; SRA: SRS2033997
Organism
Porphyromonadaceae bacterium UBA1681
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationGermany: Zoo of Hamburg
isolateUBA1681
isolation sourceFeces of three-weeks old elephant
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX498680 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated74.34%
contamination_estimated0.38%
environmental_sampletrue
genome_coverage1064.71
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1201870.
Description

Uncultivated genome recovered from an assembly of the SRX498680 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452872
ID:
6452872

BioProject SRA Nucleotide

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