U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

Uncultivated Rhodospirillaceae bacterium UBA1137 genome recovered from SRX1075082

Identifiers
BioSample: SAMN06457038; Sample name: Rhodospirillaceae bacterium UBA1137; SRA: SRS2032130
Organism
Rhodospirillaceae bacterium UBA1137
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; unclassified Rhodospirillaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAtlantic Ocean:Mid Cayman Rise
isolateUBA1137
isolation sourceBeebe hydrothermal vent plume at at depth of 4900m
metagenome sourcehydrothermal vent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1075082 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated65.00%
contamination_estimated0.69%
environmental_sampletrue
genome_coverage34.29
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2080393.
Description

Uncultivated genome recovered from an assembly of the SRX1075082 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457038
ID:
6457038

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center