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Uncultivated Bifidobacterium pseudolongum UBA1157 genome recovered from SRX688074

Identifiers
BioSample: SAMN06457169; Sample name: Bifidobacterium pseudolongum UBA1157; SRA: SRS2035592
Organism
Bifidobacterium pseudolongum
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationnot applicable
isolateUBA1157
isolation sourcemurine gut
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX688074 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.38%
contamination_estimated1.31%
environmental_sampletrue
genome_coverage11.97
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1559580.
Description

Uncultivated genome recovered from an assembly of the SRX688074 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457169
ID:
6457169

BioProject SRA Nucleotide

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