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Perdita meconis_S4 Genome

Identifiers
BioSample: SAMN32682149; Sample name: Perdita_meconis_S4; SRA: SRS18826558
Organism
Perdita meconis
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Andrenidae; Panurginae; Perditini; Perdita
Package
Invertebrate; version 1.0
Attributes
isolateS4
hostArctomecon californica
collection date2020-05-07
geographic locationUSA: NV, Clark County, 16.1km SW Whitney Pocket
tissuewhole body
altitude870 m
biomaterial providerMichael Branstetter, Pollinating Insects Research Unit, US Department of Agriculture, Agricultural Research Service (USDA-ARS)
collected byJoeseph S. Wilson
development stageadult
broad-scale environmental contextMojave Desert
identified byTerry L. Griswold
latitude and longitude36.5053 N 114.1957 W
sexmale
Description

The Mojave poppy bee, Perdtia meconis (Hymenoptera: Anthophila: Andrenidae) is a bee species of conservation concern that is restricted to desert environments in southern California, Nevada, Arizona, and Utah. It is a specialist pollinator of poppy plants and is being considered for listing under the US Endangered Species Act along with one of its host plants, the Mojave bear poppy Arctomecon californica. Here we present the first draft genome of the Mojave poppy bee in an effort to provide a genomic resource that will aid conservation efforts and future research. We also highlight how high-quality genome data can be generated from small, improperly preserved specimens using the latest PacBio sequencing instrument and reagents and discuss how this finding opens the door to biodiversity genomics. This genome represents the first genome of any bee in the family Andrenidae and one of only a few genomes of pollinator specialist bees. We compare the genome of Perdita meconis with other available bee genomes and describe the major similarities and differences.

BioProject
PRJNA923015 Perdita meconis
Retrieve all samples from this project

Submission
United States Department of Agriculture, Ligia Benavides; 2023-01-11
Accession:
SAMN32682149
ID:
32682149

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