MIGS Cultured Bacterial/Archaeal sample from Lacto... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00002229; Sample name: Lactobacillus crispatus JV-V01; SRA: SRS000258

Organism: Lactobacillus crispatus JV-V01
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus crispatus

Attributes

environmental medium	biological product [ENVO:02000043]
host	Homo sapiens
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
latitude and longitude	not determined
isolation source	missing
project name	Lactobacillus crispatus JV-V01
source material identifiers	BEI HM-103
reference for biomaterial	not determined
collection date	not determined
geographic location	not determined
environmental package	missing
isolation and growth condition	not determined
estimated size	2067000
strain	JV-V01
number of replicons	not determined
investigation type	missing
broad-scale environmental context	terrestrial biome [ENVO:00000446]
sequencing method	454-Paired-end
nucleic acid extraction	not determined
misc_param: HMP supersite	urogenital_tract
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_type	Reference Genome
finishing strategy (depth of coverage)	Level 2: High-Quality Draft60.26x;234
assembly	Newbler v. 1.1.03.24
misc_param: HMP body site	Vaginal