MAG Loc080925-4m_bin-0811 from assembly ERS4600461

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Identifiers: BioSample: SAMEA6949881; SRA: ERS4659760

Organism: uncultured bacterium
cellular organisms; Bacteria; environmental samples

Attributes

ammonium	0.011087089084761
chloride	191.3
collection date	2008-09-25
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Switzerland
investigation type	metagenome
isolation source	lake water
nitrate	0.045157721405889
nitrite	0
oxygen	9.5099914531282
pH	8.01
project name	microbes in stratified freshwaters
sample name	Loc080925-4m_bin-0811
sulfate	137.8
temperature	14.9
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T04:03:54Z
ENA-LAST-UPDATE	2020-06-18T09:06:04Z
External Id	SAMEA6949881
INSDC center name	BILS
INSDC first public	2020-06-15T04:03:54Z
INSDC last update	2020-06-18T09:06:04Z
INSDC status	public
Submitter Id	Loc080925-4m_bin-0811
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	92.92
completeness software	checkm
conductivity.	0.459
contamination score	2.58
ferric iron	0
ferrous iron	0
fluoride	n.a.
geographic location (depth)	4
geographic location (latitude)	47.01861111111111
geographic location (longitude)	6.996666666666667
gtdb_taxonomy	d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nanopelagicales;f__S36-B12;g__UBA10649
iron	0
metagenomic OTU	anoxic_mOTU_1329
metagenomic source	lake water metagenome
region	Neuchâtel
sample derived from	ERS4600461
sample owner	Stefan Bertilsson
scientific_name	uncultured bacterium
sequencing method	NovaSeq
site name	Loclat
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water