U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Assembly

Uncultivated Gammaproteobacteria bacterium UBA7803 genome recovered from ERX552257

Identifiers
BioSample: SAMN06457157; Sample name: Gammaproteobacteria bacterium UBA7803; SRA: SRS2030708
Organism
Gammaproteobacteria bacterium UBA7803
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA7803
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552257 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated85.15%
contamination_estimated3.13%
environmental_sampletrue
genome_coverage36.09
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594296.
Description

Uncultivated genome recovered from an assembly of the ERX552257 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457157
ID:
6457157

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center