Uncultivated Firmicutes bacterium UBA6811 genome r... - BioSample - NCBI

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Uncultivated Firmicutes bacterium UBA6811 genome recovered from SRX545991

Identifiers: BioSample: SAMN06456985; Sample name: Firmicutes bacterium UBA6811; SRA: SRS2034162

Organism: Firmicutes bacterium UBA6811
cellular organisms; Bacteria; Bacillati; Bacillota; unclassified Bacillota

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	Canada: Medicine Hat Glauconitic field
isolate	UBA6811
isolation source	waste water
metagenome source	hydrocarbon metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX545991 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	87.91%
contamination_estimated	4.68%
environmental_sample	true
genome_coverage	17.52
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1290767,SRR1290771,SRR1290769,SRR1290772,SRR1290774,SRR1290764.

Description: Uncultivated genome recovered from an assembly of the SRX545991 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06456985
ID:: 6456985

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Uncultivated Firmicutes bacterium UBA6811 genome recovered from SRX545991
Uncultivated Firmicutes bacterium UBA6811 genome recovered from SRX545991

biosample
RecName: Full=Ubiquitin-protein ligase E3B; AltName: Full=HECT-type ubiquitin tr...
RecName: Full=Ubiquitin-protein ligase E3B; AltName: Full=HECT-type ubiquitin transferase E3B
gi|296453010|sp|Q7Z3V4.3|UBE3B_HUMA

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