U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Assembly

Uncultivated Verrucomicrobia bacterium UBA5540 genome recovered from SRX472115

Identifiers
BioSample: SAMN06450402; Sample name: Verrucomicrobia bacterium UBA5540; SRA: SRS2033915
Organism
Verrucomicrobia bacterium UBA5540
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; unclassified Verrucomicrobiota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationHong Kong
isolateUBA5540
isolation sourcewater
metagenome sourcewastewater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX472115 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated74.16%
contamination_estimated2.06%
environmental_sampletrue
genome_coverage6.78
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1171178.
Description

Uncultivated genome recovered from an assembly of the SRX472115 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450402
ID:
6450402

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center