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Uncultivated Micrococcaceae bacterium UBA5788 genome recovered from SRX823275

Identifiers
BioSample: SAMN06456396; Sample name: Micrococcaceae bacterium UBA5788; SRA: SRS2034778
Organism
Micrococcaceae bacterium UBA5788
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae; unclassified Micrococcaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5788
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823275 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.01%
contamination_estimated0.33%
environmental_sampletrue
genome_coverage36.6
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749892.
Description

Uncultivated genome recovered from an assembly of the SRX823275 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456396
ID:
6456396

BioProject SRA Nucleotide

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