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Uncultivated Gammaproteobacteria bacterium UBA3067 genome recovered from SRX559946

Identifiers
BioSample: SAMN06450394; Sample name: Gammaproteobacteria bacterium UBA3067; SRA: SRS2034323
Organism
Gammaproteobacteria bacterium UBA3067
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Coal Oil Point, Santa Barbara, California
isolateUBA3067
isolation sourceOil polluted marine water
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX559946 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.08%
contamination_estimated0.63%
environmental_sampletrue
genome_coverage560.92
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313318.
Description

Uncultivated genome recovered from an assembly of the SRX559946 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450394
ID:
6450394

BioProject SRA Nucleotide

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