Sample 1_HeLa cells, 80S footprints, NT control, r... - BioSample - NCBI

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Sample 1_HeLa cells, 80S footprints, NT control, rep1

Identifiers: BioSample: SAMN31544958; SRA: SRS15605572; GEO: GSM6701450

Organism: Homo sapiens (human)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo

Attributes

source name	HeLa
cell line	HeLa
cell type	human epithelial cell
genotype	WT
treatment	non-targeting siRNA, 72 hours
geographic location	missing
collection date	missing
molecule subtype	80S RNA footprints

Links: GEO Sample GSM6701450

BioProject: PRJNA896488 Differential expression analysis connects knock-downs of eIF3e and eIF3d with the MAP kinase signaling pathway
Retrieve all samples from this project

Submission: Laboratory of Regulation of Gene Expression, Institute of Microbiology of the Czech Academy of Sciences, Anna Herrmannová; 2022-11-01

Accession:: SAMN31544958
ID:: 31544958

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Sample 1_HeLa cells, 80S footprints, NT control, rep1
Sample 1_HeLa cells, 80S footprints, NT control, rep1

biosample
PREDICTED: Canis lupus familiaris LEM domain containing 3 (LEMD3), transcript va...
PREDICTED: Canis lupus familiaris LEM domain containing 3 (LEMD3), transcript variant X2, misc_RNA
gi|1952670920|ref|XR_005410784.1|

Nucleotide
SRX5492105 (1)
SRA
Phymatotrichopsis omnivora 18S ribosomal RNA gene, partial sequence; internal tr...
Phymatotrichopsis omnivora 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
PopSet: 45239001

PopSet
RecName: Full=Tubulin polyglutamylase complex subunit 1; Short=PGs1
RecName: Full=Tubulin polyglutamylase complex subunit 1; Short=PGs1
gi|114152292|sp|Q6ZTW0.2|TPGS1_HUMA

Protein

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