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Microbacteriaceae MAG, UW_MP_MIC1_2

Identifiers
BioSample: SAMN22412281; Sample name: UW_MP_MIC1_2
Organism
Microbacteriaceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; unclassified Microbacteriaceae
Package
MIMAG: metagenome-assembled genome; version 6.0
Attributes
collection date2019-09-11
geographic locationUSA: Madison, WI
latitude and longitude43.033933 N 89.356452 W
isolation sourceanaerobic bioreactor effluent
isolateUW_MP_MIC1_2
broad-scale environmental contextbioreactor [ENVO:00002123]
local-scale environmental contextanaerobic bioreactor [ENVO:00002124]
environmental mediumbiological waste material [ENVO:01000373]
altitude268 m
ammonium461.7 milligram per liter
dissolved oxygen0 micromole per kilogram
pH5.5
phosphatemissing
reference for biomaterial3300045596_21
relationship to oxygenanaerobe
sample collection device or methodSyringe
sample material processingBiomass centrifuged 10 min 10,000xg, aliquot frozen for DNA extraction
sample size2 milliliter
sample storage locationFreezer
sample storage temperature-80 degree Celcius
source material identifiersUSB_077
temperature21 degree Celcius
sample typemetagenomic assembly
metagenome sourcebioreactor sludge metagenome
derived fromSAMN22064489
metagenomic1
environmental-sample1
Description

Improved metagenome assembled genome from a ultra-filtered-milk-permeate fermenting bioreactor. This bioreactor was operated as a upflow sludge blanket reactor with a 1.4 day hydraulic retention time and dynamic solids retention time. It was operated under anaerobic conditions and was fed ultra-filtered milk permeate, ammended with 300 mg N-NH4Cl/L. This sample was from the 77 day of operation.

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA768548 bioreactor sludge metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Kevin Myers; 2021-10-19
Accession:
SAMN22412281
ID:
22412281

BioProject Nucleotide

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