Pathogen: environmental/food/other sample from Esc... - BioSample

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Identifiers: BioSample: SAMN10221269; Sample name: CVM N17EC0648; SRA: SRS3967567

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Attributes

BioProject: PRJNA292663 Escherichia coli
Retrieve all samples from this project

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	==	2/1	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	susceptible	==	8	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	susceptible	==	0.25/4.75	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

biosample
Escherichia coli strain CVM N17EC0476, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC0476, whole genome shotgun sequencing project
gi|1517386643|gb|ROCB00000000.1|ROC 0000

Nucleotide
Escherichia coli strain CVM N17EC1452, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC1452, whole genome shotgun sequencing project
gi|1516365368|gb|ROGE00000000.1|ROG 0000

Nucleotide
Escherichia coli strain CVM N17EC0386, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC0386, whole genome shotgun sequencing project
gi|1517386712|gb|ROAX00000000.1|ROA 0000

Nucleotide
Escherichia coli strain CVM N17EC1040, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC1040, whole genome shotgun sequencing project
gi|1517386552|gb|RNWS00000000.1|RNW 0000

Nucleotide

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