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Microbe sample from Xanthomonas citri pv. vignicola

Identifiers
BioSample: SAMN07252112; Sample name: CFBP7111
Organism
Xanthomonas citri pv. vignicola
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas; Xanthomonas citri group; Xanthomonas citri
Package
Microbe; version 1.0
Attributes
strainCFBP7111
hostCowpea
collection date1942
geographic locationUSA: Texas
sample typecell culture
biomaterial providerCFBP
collected byBurkholder W.H.
culture collectionCFBP:7111
pathovarvignicola
Description

Xanthomonas citri pv. vignicola is responsible for bacterial blight of cowpea. This seed-borne disease causes mortality of seedlings, stem cankers, bushy and stunted growth, leaf and pod blight and high yield losses in severely affected crops. We provided genomes sequenced by single molecule real time (SMRT) sequencing for three strains of X. citri pv. vignicola. These genomes will help to gain more informations on this plant pathogen. In particular, SMRT sequencing will allow the analysis of complex genes containing internal repeats such as Transcription Activator-Like (TAL) effectors.

BioProject
PRJNA390891 Xanthomonas citri pv. vignicola strain:CFBP7111
Retrieve all samples from this project

Submission
IRHS, Nicolas Chen; 2017-06-19
Accession:
SAMN07252112
ID:
7252112

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