U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Lentisphaeria bacterium UBA1784 genome recovered from SRX498681

Identifiers
BioSample: SAMN06457770; Sample name: Lentisphaeria bacterium UBA1784; SRA: SRS2034061
Organism
Lentisphaeria bacterium UBA1784
cellular organisms; Bacteria; PVC group; Lentisphaerota; Lentisphaeria; unclassified Lentisphaeria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationGermany: Zoo of Hamburg
isolateUBA1784
isolation sourceFeces of six-years-old elephant
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX498681 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated83.83%
contamination_estimated6.08%
environmental_sampletrue
genome_coverage13.15
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1221442.
Description

Uncultivated genome recovered from an assembly of the SRX498681 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457770
ID:
6457770

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center