U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Sphingobacteriaceae bacterium UBA5527 genome recovered from SRX823264

Identifiers
BioSample: SAMN06457709; Sample name: Sphingobacteriaceae bacterium UBA5527; SRA: SRS2034767
Organism
Sphingobacteriaceae bacterium UBA5527
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; unclassified Sphingobacteriaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5527
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823264 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.67%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage14.4
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749881.
Description

Uncultivated genome recovered from an assembly of the SRX823264 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457709
ID:
6457709

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center