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Uncultivated Porticoccaceae bacterium UBA4026 genome recovered from SRX1050770

Identifiers
BioSample: SAMN06457602; Sample name: Porticoccaceae bacterium UBA4026; SRA: SRS2032099
Organism
Porticoccaceae bacterium UBA4026
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Porticoccaceae; unclassified Porticoccaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationBaltic Sea
isolateUBA4026
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1050770 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.70%
contamination_estimated5.00%
environmental_sampletrue
genome_coverage15.15
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR2053302.
Description

Uncultivated genome recovered from an assembly of the SRX1050770 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457602
ID:
6457602

BioProject SRA Nucleotide

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