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Uncultivated Ruminococcus sp. UBA5129 genome recovered from SRX147036

Identifiers
BioSample: SAMN06456532; Sample name: Ruminococcus sp. UBA5129; SRA: SRS2032331
Organism
Ruminococcus sp. UBA5129
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Ruminococcus; unclassified Ruminococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5129
isolation sourceguineaPig1
metagenome sourceCavia porcellus metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX147036 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.14%
contamination_estimated2.35%
environmental_sampletrue
genome_coverage11.26
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the Cavia porcellus metagenome reads: SRR495409.
Description

Uncultivated genome recovered from an assembly of the SRX147036 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456532
ID:
6456532

BioProject SRA Nucleotide

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