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Uncultivated Thiotrichaceae bacterium UBA4486 genome recovered from SRX621521

Identifiers
BioSample: SAMN06456371; Sample name: Thiotrichaceae bacterium UBA4486; SRA: SRS2034375
Organism
Thiotrichaceae bacterium UBA4486
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; unclassified Thiotrichaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Washington, DC
isolateUBA4486
isolation sourceBiofilm grown on the Cathode of a Microbial Fuel Cell (Biofilm MCL)
metagenome sourcebiofilm metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX621521 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.62%
contamination_estimated1.82%
environmental_sampletrue
genome_coverage134.32
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the biofilm metagenome reads: SRR1450398.
Description

Uncultivated genome recovered from an assembly of the SRX621521 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456371
ID:
6456371

BioProject SRA Nucleotide

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