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Uncultivated Akkermansiaceae bacterium UBA1982 genome recovered from ERX555916

Identifiers
BioSample: SAMN06456343; Sample name: Akkermansiaceae bacterium UBA1982; SRA: SRS2031130
Organism
Akkermansiaceae bacterium UBA1982
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; Verrucomicrobiia; Verrucomicrobiales; Akkermansiaceae; unclassified Akkermansiaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1982
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX555916 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated84.27%
contamination_estimated1.08%
environmental_sampletrue
genome_coverage14.92
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599163.
Description

Uncultivated genome recovered from an assembly of the ERX555916 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456343
ID:
6456343

BioProject SRA Nucleotide

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