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Uncultivated Candidatus Microthrix sp. UBA3125 genome recovered from SRX648503

Identifiers
BioSample: SAMN06456239; Sample name: Candidatus Microthrix sp. UBA3125; SRA: SRS2035533
Organism
Candidatus Microthrix sp. UBA3125
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Acidimicrobiia; Acidimicrobiales; Microthrixaceae; Candidatus Microthrix; unclassified Candidatus Microthrix
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationMexico: oxygen minimum zone off the coast of Manzanillo
isolateUBA3125
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX648503 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.88%
contamination_estimated1.28%
environmental_sampletrue
genome_coverage8.44
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1509800.
Description

Uncultivated genome recovered from an assembly of the SRX648503 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456239
ID:
6456239

BioProject SRA Nucleotide

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