U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Neorhizobium sp. UBA3556 genome recovered from SRX823122

Identifiers
BioSample: SAMN06456094; Sample name: Neorhizobium sp. UBA3556; SRA: SRS2034613
Organism
Neorhizobium sp. UBA3556
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium; unclassified Neorhizobium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3556
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823122 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.66%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage166.12
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749739.
Description

Uncultivated genome recovered from an assembly of the SRX823122 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456094
ID:
6456094

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center