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Uncultivated Ruminococcaceae bacterium UBA5413 genome recovered from SRX691280

Identifiers
BioSample: SAMN06455993; Sample name: Ruminococcaceae bacterium UBA5413; SRA: SRS2035927
Organism
Ruminococcaceae bacterium UBA5413
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA5413
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691280 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated88.59%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage17.75
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562005.
Description

Uncultivated genome recovered from an assembly of the SRX691280 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455993
ID:
6455993

BioProject SRA Nucleotide

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