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Uncultivated Candidatus Omnitrophica bacterium UBA1572 genome recovered from SRX667739

Identifiers
BioSample: SAMN06455835; Sample name: Candidatus Omnitrophica bacterium UBA1572; SRA: SRS2035540
Organism
Candidatus Omnitrophica bacterium UBA1572
cellular organisms; Bacteria; PVC group; Candidatus Omnitrophota; unclassified Candidatus Omnitrophota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Crystal Geyser near Green River, Utah
isolateUBA1572
isolation sourcewater
metagenome sourcegroundwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX667739 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.18%
contamination_estimated6.01%
environmental_sampletrue
genome_coverage12.85
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1534154.
Description

Uncultivated genome recovered from an assembly of the SRX667739 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455835
ID:
6455835

BioProject SRA Nucleotide

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