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Uncultivated Streptococcus sp. UBA6071 genome recovered from SRX216765

Identifiers
BioSample: SAMN06455619; Sample name: Streptococcus sp. UBA6071; SRA: SRS2032633
Organism
Streptococcus sp. UBA6071
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; unclassified Streptococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA6071
isolation sourcegrass carp
metagenome sourceCtenopharyngodon idella metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX216765 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.08%
contamination_estimated0.31%
environmental_sampletrue
genome_coverage10.22
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the Ctenopharyngodon idella metagenome reads: SRR822554,SRR822555,SRR822550,SRR650119,SRR822548,SRR822536,SRR822533,SRR822552,SRR822540,SRR822543,SRR822538,SRR822546,SRR822535,SRR822542,SRR650118,SRR822549,SRR822547,SRR822553,SRR822534,SRR822545,SRR822541,SRR822544,SRR822539,SRR822551,SRR822537.
Description

Uncultivated genome recovered from an assembly of the SRX216765 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455619
ID:
6455619

BioProject SRA Nucleotide

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