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Uncultivated Smithella sp. UBA6208 genome recovered from SRX327522

Identifiers
BioSample: SAMN06455447; Sample name: Smithella sp. UBA6208; SRA: SRS2033417
Organism
Smithella sp. UBA6208
cellular organisms; Bacteria; Thermodesulfobacteriota; Syntrophia; Syntrophales; Smithellaceae; Smithella; unclassified Smithella
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Medicine Hat Glauconitic field
isolateUBA6208
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327522 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.76%
contamination_estimated1.29%
environmental_sampletrue
genome_coverage144.54
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318.
Description

Uncultivated genome recovered from an assembly of the SRX327522 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455447
ID:
6455447

BioProject SRA Nucleotide

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