Uncultivated Pseudomonas stutzeri UBA872 genome re... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Uncultivated Pseudomonas stutzeri UBA872 genome recovered from SRX822432

Identifiers: BioSample: SAMN06455328; Sample name: Pseudomonas stutzeri UBA872; SRA: SRS2038895

Organism: Stutzerimonas stutzeri
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Stutzerimonas; Stutzerimonas stutzeri group; Stutzerimonas stutzeri subgroup

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	USA:New York City
isolate	UBA872
isolation source	metal/plastic
metagenome source	terrestrial metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX822432 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	89.75%
contamination_estimated	1.50%
environmental_sample	true
genome_coverage	15.12
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749049.

Description: Uncultivated genome recovered from an assembly of the SRX822432 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06455328
ID:: 6455328

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly

Recent activity

Clear Turn Off Turn On

Uncultivated Pseudomonas stutzeri UBA872 genome recovered from SRX822432
Uncultivated Pseudomonas stutzeri UBA872 genome recovered from SRX822432

biosample
Uncultivated Pelotomaculum sp. UBA3102 genome recovered from SRX993394
Uncultivated Pelotomaculum sp. UBA3102 genome recovered from SRX993394

biosample
Uncultivated Idiomarina sp. UBA3162 genome recovered from ERX556045
Uncultivated Idiomarina sp. UBA3162 genome recovered from ERX556045

biosample
Uncultivated Psychrobacter sp. UBA2769 genome recovered from SRX560108
Uncultivated Psychrobacter sp. UBA2769 genome recovered from SRX560108

biosample
Uncultivated Enterobacteriaceae bacterium UBA4534 genome recovered from SRX82268...
Uncultivated Enterobacteriaceae bacterium UBA4534 genome recovered from SRX822688

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample