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Uncultivated Atopobium sp. UBA2090 genome recovered from SRX516605

Identifiers
BioSample: SAMN06454938; Sample name: Atopobium sp. UBA2090; SRA: SRS2034127
Organism
Atopobium sp. UBA2090
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium; unclassified Atopobium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationGermany: South-West Germany
isolateUBA2090
isolation sourcewater
metagenome sourcewastewater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX516605 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.15%
contamination_estimated0.95%
environmental_sampletrue
genome_coverage9.49
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1237780.
Description

Uncultivated genome recovered from an assembly of the SRX516605 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454938
ID:
6454938

BioProject SRA Nucleotide

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