U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Gammaproteobacteria bacterium UBA5518 genome recovered from ERX656386

Identifiers
BioSample: SAMN06454908; Sample name: Gammaproteobacteria bacterium UBA5518; SRA: SRS2031807
Organism
Gammaproteobacteria bacterium UBA5518
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5518
isolation sourcewastewater treatment plant
metagenome sourcewastewater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX656386 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated68.45%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage15.34
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: ERR712376.
Description

Uncultivated genome recovered from an assembly of the ERX656386 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454908
ID:
6454908

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center