Uncultivated Rhodocyclaceae bacterium UBA1310 geno... - BioSample - NCBI

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Uncultivated Rhodocyclaceae bacterium UBA1310 genome recovered from SRX118448

Identifiers: BioSample: SAMN06454772; Sample name: Rhodocyclaceae bacterium UBA1310; SRA: SRS2032224

Organism: Rhodocyclaceae bacterium UBA1310
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; unclassified Rhodocyclaceae

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	NULL
isolate	UBA1310
isolation source	soil
metagenome source	soil metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX118448 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	92.75%
contamination_estimated	1.66%
environmental_sample	true
genome_coverage	20.93
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR404117.

Description: Uncultivated genome recovered from an assembly of the SRX118448 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06454772
ID:: 6454772

BioProject SRA Nucleotide

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