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Uncultivated Alicycliphilus sp. UBA2076 genome recovered from SRX822392

Identifiers
BioSample: SAMN06454684; Sample name: Alicycliphilus sp. UBA2076; SRA: SRS2038825
Organism
Alicycliphilus sp. UBA2076
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus; unclassified Alicycliphilus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA2076
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822392 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated69.62%
contamination_estimated1.30%
environmental_sampletrue
genome_coverage193.4
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749009.
Description

Uncultivated genome recovered from an assembly of the SRX822392 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454684
ID:
6454684

BioProject SRA Nucleotide

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