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Uncultivated Paludibacter sp. UBA5753 genome recovered from SRX210886

Identifiers
BioSample: SAMN06454541; Sample name: Paludibacter sp. UBA5753; SRA: SRS2032532
Organism
Paludibacter sp. UBA5753
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; Paludibacter; unclassified Paludibacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Northern Alberta
isolateUBA5753
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX210886 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.70%
contamination_estimated0.81%
environmental_sampletrue
genome_coverage60.84
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636559.
Description

Uncultivated genome recovered from an assembly of the SRX210886 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454541
ID:
6454541

BioProject SRA Nucleotide

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