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Uncultivated Hyphomonas sp. UBA1469 genome recovered from ERX552340

Identifiers
BioSample: SAMN06454085; Sample name: Hyphomonas sp. UBA1469; SRA: SRS2031021
Organism
Hyphomonas sp. UBA1469
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomonadales; Hyphomonadaceae; Hyphomonas; unclassified Hyphomonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1469
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552340 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.40%
contamination_estimated0.51%
environmental_sampletrue
genome_coverage28.08
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594399.
Description

Uncultivated genome recovered from an assembly of the ERX552340 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454085
ID:
6454085

BioProject SRA Nucleotide

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