U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Amoebophilaceae bacterium UBA1467 genome recovered from SRX319062

Identifiers
BioSample: SAMN06454075; Sample name: Amoebophilaceae bacterium UBA1467; SRA: SRS2033219
Organism
Amoebophilaceae bacterium UBA1467
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Cytophagia; Cytophagales; Amoebophilaceae; unclassified Amoebophilaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1467
isolation sourcewater
metagenome sourcemicrobial mat metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX319062 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated77.92%
contamination_estimated0.64%
environmental_sampletrue
genome_coverage9.54
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the microbial mat metagenome reads: SRR931067.
Description

Uncultivated genome recovered from an assembly of the SRX319062 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454075
ID:
6454075

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center