Uncultivated Acetobacteraceae bacterium UBA6159 ge... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Uncultivated Acetobacteraceae bacterium UBA6159 genome recovered from SRX327520

Identifiers: BioSample: SAMN06453532; Sample name: Acetobacteraceae bacterium UBA6159; SRA: SRS2033237

Organism: Acetobacteraceae bacterium UBA6159
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	Canada: Near Fort McMurray in northeastern Alberta
isolate	UBA6159
isolation source	waste water
metagenome source	hydrocarbon metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX327520 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	71.74%
contamination_estimated	0.50%
environmental_sample	true
genome_coverage	48.18
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943325,SRR943327,SRR943323,SRR943326,SRR942940,SRR943328,SRR943324.

Description: Uncultivated genome recovered from an assembly of the SRX327520 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06453532
ID:: 6453532

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly

Recent activity

Clear Turn Off Turn On

Uncultivated Acetobacteraceae bacterium UBA6159 genome recovered from SRX327520
Uncultivated Acetobacteraceae bacterium UBA6159 genome recovered from SRX327520

biosample
Uncultivated Pseudomonas stutzeri UBA7847 genome recovered from SRX822444
Uncultivated Pseudomonas stutzeri UBA7847 genome recovered from SRX822444

biosample
Uncultivated Spirochaetaceae bacterium UBA5556 genome recovered from SRX392470
Uncultivated Spirochaetaceae bacterium UBA5556 genome recovered from SRX392470

biosample
MAG TPA_asm: Propionibacteriaceae bacterium UBA5174, whole genome shotgun sequen...
MAG TPA_asm: Propionibacteriaceae bacterium UBA5174, whole genome shotgun sequencing project
gi|1249137835|tpg|DHWU00000000.1|DH 00000

Nucleotide
MAG TPA_asm: Bacteroidales bacterium UBA4989, whole genome shotgun sequencing pr...
MAG TPA_asm: Bacteroidales bacterium UBA4989, whole genome shotgun sequencing project
gi|1247278677|tpg|DGZD00000000.1|DG 00000

Nucleotide

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample