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Uncultivated Vibrio metoecus UBA1833 genome recovered from SRX702749

Identifiers
BioSample: SAMN06453459; Sample name: Vibrio metoecus UBA1833; SRA: SRS2036120
Organism
Vibrio metoecus
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSpain: Alfacada pond, Ebro delta, Tarragona
isolateUBA1833
isolation sourceepidermal mucus of Anguilla anguilla fishes in Ebro delta
metagenome sourcefish metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX702749 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated60.16%
contamination_estimated0.37%
environmental_sampletrue
genome_coverage16.16
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fish metagenome reads: SRR1578065.
Description

Uncultivated genome recovered from an assembly of the SRX702749 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453459
ID:
6453459

BioProject SRA Nucleotide

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