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Uncultivated Syntrophomonas sp. UBA5316 genome recovered from SRX691263

Identifiers
BioSample: SAMN06453315; Sample name: Syntrophomonas sp. UBA5316; SRA: SRS2035602
Organism
Syntrophomonas sp. UBA5316
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Syntrophomonadaceae; Syntrophomonas; unclassified Syntrophomonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA5316
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691263 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.33%
contamination_estimated3.70%
environmental_sampletrue
genome_coverage72.47
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561950.
Description

Uncultivated genome recovered from an assembly of the SRX691263 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453315
ID:
6453315

BioProject SRA Nucleotide

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